Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924929.1_cds_XP_016473207.1_65360
CDS Infomation

[gene=LOC107795138] [db_xref=GeneID:107795138] [protein=uncharacterized protein LOC107795138] [protein_id=XP_016473207.1] [location=join(97019..97074,97190..97288,97456..97667,100174..100367,100475..100580,100688..100995,103557..103970,104446..104527,104636..106150,107055..107209)] [gbkey=CDS]
Sequence

ATGAGCTCGGGGATTGATGATGGAAGCTCCACCAATTGCGCATCAGAAGCTCGAAAGCAT
TCAAGAATATCATATTCGAGAGAGTTTTTGTTGTCGATAAGTCGACTGGAGATTTGCGAG
AAGTTGCCAAGTGAATTTGATCAGTCGATCCTGAGTGAATTTGTGGACATTTCACATAGC
ATACAAGACCGCCAAAGAGTACCTGGCAGCTTGCCTTTGCAAGGGTTTAGACGTACTGAC
TATAGTTCATCCCCACCTACTCGTGGGGATTCCAGTAGTTATTCACGAGGCAATTTTGGA
AGATGGGAAAGCCGTTCCTCTGGACGGAGTGATCGAGATAACGAGTCACAATCTGATCGG
GATTCAGATTCTGGTTGGAGATCTGGCAATCAAGCCCAGCACACTCGGCAGAGTTCTGAG
CATGATGGGCTTCTTGGAAGTGGTTCATTTCCAAGGCCGTCAGCATATGCATCTGGAATA
TCTGCACCTAAGGTCCGAGCAAGCAATAACTATCAATCTAACAAGAGCAACGAGCCATAT
CATCCTCCTCGCCCTTATAAGGCGGGACCTCACTCTCGAAGAGACACTGATGCGTTCAAT
GACGAGACTTTTGGTTCAGTTGAGTGTACGAGTGAGGATAGAGTGGAAGAGGAAAGAAGG
AGAAGAGCTTCCTTTGAGTTAATTAGGAAAGAACAGCAGAAAGCTCTTCAAGAAAAGCAG
AAGTCAAAACTGGAGAAGCATAAAACCGAGGACATCTCGGTACTGCTGGAAGAGACTAAG
GAGGATAGAACGTTTTTGGACAAAAATAGTGAAGCAGATGGGATGACCACACAACCTTTC
GCAACCAGTGATCTGGGAAAATCTTCTTTTCCTTCACAGAATCCACCAGCTAGACCGCGT
GTACCCCCTGGCTTTAAAACCACTGTTTTGGATAAGAACTCTGGCTCAAGTTTGAGCCAT
TCACGCGTGGCAGAGGTTGGACAACCTGACACTGAAGAAAGCCCATTGGAAGCCAAAGCC
TATGCTGCCCCGAACGGTGTTCTTCAGAGTGTAGAGAGACAGAGCTTGCAAGAAATTAGT
TCAAGTTATAAACTTGAAACTAGGAGTTTGCATGCATCAACTCTGAAGAAGAATGACCAA
ATTGCTAATCTTTCAGCAAGATCAGATATTTCTGATGGGATACTTGGCATGGAAGATCGT
TTAAATCGGATTACCAGTCATTTAGAGTTCCACGAAGCCTTGGAAGAGCCTGAAATTATT
GAAAACAGTACTCAGCCTTCTGGTAGCAAATTTGATGAGTCTAGCCCCAACCCTTCAACA
TCAATCTTGGATAAGATATTTGGAGGTGTTGTAGCAATTAATGTTGGCGACTCTGAGGCT
CCAATTGTGAATGACAATATTAAACCGAATGACATGTTGGGCTCCAAGGCTATAGAATCT
TCGAAGTTCTCTCAGTGGTTTATGGAAGAAGATAGGAAGCCACCAGAAGATTCCTCGTTA
AGTAGGCCAAACGATTTGCTTGCCTTAATTGTTGGCGGCGATAAAACCAGATCACAAGCT
TTTGATGGAAATGTTTCAGAATGCTTTCCATCTGAAAATTTCATTCAGAGTACTGAGCCT
ACAAGTAAGGTCACATTGCATATGCCTTCTGCACCACCTGGGATATCTGAGCCTATGTAT
GAGTCTAGTAAAAGGGAGGCAGCCCCGTCGATCTTTACTTGTGAGGACCTTGAGCATAAA
ATGCTGTCAGAGTTTGGTGAAAAGAGTTCTAATCTGCATTTTACTTCACAAGGTTGCGGT
ACTAATCGCTTAGACACTGAAGAACAACCCGTAATTGTGGACAGCCATGCATCTCAACAC
CTCCTTTCATTATTACAGAAGGGGCCAGATCATACAAATATGACAGAGAAGGGCAGTACT
GGCACTGAAGCCAGGAATGGACATGTTAAGTTTACCGTGCATGACCGATCTAAGGAGGAA
GATACCAGGGATCCTCAAGCTTCAGGAAAAGCAGTTACACTTGAAACGCTTTTTGGAACT
GCTTTTATGAAGGAGCTGCAATCTGTACAAGCTCCAGTTTCAGTTCAGAGGAGCTCAGTT
GGTTCTGCACTAATTGATGGTTTGGAGACACGCAAGTCATCCTTGTCTGGTTTTGATGAC
GGCCTTTTTTCTTCCATAAGTGATGGTATTGGACCAAAAGGAGGCGGTAAGGAGAACAGG
CTCTTGCAGTTGAATCACAGAGGTCAAACCAAGCTGGATGAGCCTCAAACCTGGTTGGGA
TATGAAAATTCTCAGTATGAAGTTAAATCAAGGCACCCGAGTGAAATGTTTTCCAAGAGT
GAGGCTGTTGAATATCACCTGCCTGCAGAAGACTTAATTAGTGCTCGTGATCATTTGAGT
CCCCAGGTCTCAATGGTTATGCCTGCAGGAATTTTGAGTAAAGGAGACTTGACAACTGGT
AGTGGCGCTGGCGGTGATGGAAGGTCTTTGATGAGTGAAGGTCTGCCCTTCCCACGTGTT
TCCTATGATCAGATGGAGTCTGAAATGCCATTGCACCATATTCGTGCTCAACCATCTACT
TCGCAATTTCATCCCTTGCAGATGAGTCAAGGGAAGCCATTGTTTCATCCTATGGATTCT
GGTCCTGCTCATTTAAATCCTCAGATTTTCAATGGTCCAGAAAGCATGGCTCTACATGAT
GCTCCTGGTCGTCAGTTTGCTGGAAATATGATGCGACCTCCATTTCACCACCCTAATGGT
GGACTGACAGGGTTTGATCTCCCCGTTCACCATCCTATGCTGCAGCAGATGCGGATGGCT
GGAAATAGCCCTCCTCGTCTGCTACACGACCGTCTAAGGGGTGCACAGGTTCCTTCACAT
CTCAGTAATCAAGCAGCTAGCATCATGCAGGAAGTTAACAGAATTCAAGCATTCCCTTTT
GCGCCACACCAAGTCAACATTAGTGGCCAAGCTGTGCAAATGCCAGCTCCAGATATCAAC
ACCAGAAACATTCATCCAGAGGCCTTGCAAAGGCTTGTTGAGAGGCAACTTGGGGCTTCT
AAGCAGATACACCCTTTTGCTGCTGGCAATGTCCAGGGGATGCACGGCCACGAGCTTGAC
ATGGGATTGCGATATAGATAG

Peptide Sequence

PEP ID

XP_016473207.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107795138 [Nicotiana tabacum]
Sequence

MSSGIDDGSSTNCASEARKHSRISYSREFLLSISRLEICEKLPSEFDQSILSEFVDISHS
IQDRQRVPGSLPLQGFRRTDYSSSPPTRGDSSSYSRGNFGRWESRSSGRSDRDNESQSDR
DSDSGWRSGNQAQHTRQSSEHDGLLGSGSFPRPSAYASGISAPKVRASNNYQSNKSNEPY
HPPRPYKAGPHSRRDTDAFNDETFGSVECTSEDRVEEERRRRASFELIRKEQQKALQEKQ
KSKLEKHKTEDISVLLEETKEDRTFLDKNSEADGMTTQPFATSDLGKSSFPSQNPPARPR
VPPGFKTTVLDKNSGSSLSHSRVAEVGQPDTEESPLEAKAYAAPNGVLQSVERQSLQEIS
SSYKLETRSLHASTLKKNDQIANLSARSDISDGILGMEDRLNRITSHLEFHEALEEPEII
ENSTQPSGSKFDESSPNPSTSILDKIFGGVVAINVGDSEAPIVNDNIKPNDMLGSKAIES
SKFSQWFMEEDRKPPEDSSLSRPNDLLALIVGGDKTRSQAFDGNVSECFPSENFIQSTEP
TSKVTLHMPSAPPGISEPMYESSKREAAPSIFTCEDLEHKMLSEFGEKSSNLHFTSQGCG
TNRLDTEEQPVIVDSHASQHLLSLLQKGPDHTNMTEKGSTGTEARNGHVKFTVHDRSKEE
DTRDPQASGKAVTLETLFGTAFMKELQSVQAPVSVQRSSVGSALIDGLETRKSSLSGFDD
GLFSSISDGIGPKGGGKENRLLQLNHRGQTKLDEPQTWLGYENSQYEVKSRHPSEMFSKS
EAVEYHLPAEDLISARDHLSPQVSMVMPAGILSKGDLTTGSGAGGDGRSLMSEGLPFPRV
SYDQMESEMPLHHIRAQPSTSQFHPLQMSQGKPLFHPMDSGPAHLNPQIFNGPESMALHD
APGRQFAGNMMRPPFHHPNGGLTGFDLPVHHPMLQQMRMAGNSPPRLLHDRLRGAQVPSH
LSNQAASIMQEVNRIQAFPFAPHQVNISGQAVQMPAPDINTRNIHPEALQRLVERQLGAS
KQIHPFAAGNVQGMHGHELDMGLRYR

Transcript Sequence

Gene sequence data has not been registered.